6MHD

Target information

RCSB PDB
6MHD
Title
Glutathione S-Transferase Omega 1 bound to covalent inhibitor 44
Method
X-RAY DIFFRACTION
Resolution
2.16
Classification
Transferase/Transferase Inhibitor
Organism
Homo sapiens
Protein
Glutathione S-transferase omega-1 (P78417)    Looking for covalent inhibitors of this target ?
Year
2018
Publication Title
Structure-Based Design of N-(5-Phenylthiazol-2-yl)acrylamides as Novel and Potent Glutathione S-Transferase Omega 1 Inhibitors.
Abstract

Using reported glutathione S-transferase omega 1 (GSTO1-1) cocrystal structures, we designed and synthesized acrylamide-containing compounds that covalently bind to Cys32 on the catalytic site. Starting from a thiazole derivative 10 (GSTO1-1 IC 50 = 0.6 ??M), compound 18 was synthesized and cocrystallized with GSTO1. Modification on the amide moiety of hit compound 10 significantly increased the GSTO1-1 inhibitory potency. We solved the cocrystal structures of new derivatives, 37 and 44, bearing an amide side chain bound to GSTO1. These new structures showed a reorientation of the phenyl thiazole core of inhibitors, 37 and 44, when compared to 18. Guided by the cocrystal structure of GSTO1:44, analogue 49 was designed, resulting in the most potent GSTO1-1 inhibitor (IC 50 = 0.22 ?? 0.02 nM) known to date. We believe that our data will form the basis for future studies of developing GSTO1-1 as a new drug target for cancer therapy.

External Link
RCSB PDB





Ligand information

HET
JRD
Chain ID
B
HET Number
301
Molecular Formula
C17H15N3O2S
Structure
2D structure
IUPAC Name
N-[(3-methylisoxazol-5-yl)methyl]-N-(4-phenylthiazol-2-yl)prop-2-enamide
InChI
InChI=1S/C17H15N3O2S/c1-3-16(21)20(10-14-9-12(2)19-22-14)17-18-15(11-23-17)13-7-5-4-6-8-13/h3-9,11H,1,10H2,2H3
InChI Key
QTXKMZWSNNBMRC-UHFFFAOYSA-N
Canonical SMILES
Cc1cc(on1)CN(C(=O)C=C)c2nc(cs2)-c3ccccc3
Bioactivity data
CI005211

Covalent Binding

Warhead
Michael Acceptor
Reaction Mechanism
Michael Addition
Residue
CYS : 32
Residue Chain
B
Interactions
Pharmacophore Model