5TTV

Target information

RCSB PDB
5TTV
Title
Jak3 with covalent inhibitor 6
Method
X-RAY DIFFRACTION
Resolution
1.93
Classification
TRANSFERASE/TRANSFERASE inhibitor
Organism
Homo sapiens
Protein
Tyrosine-protein kinase JAK3 (P52333)    Looking for covalent inhibitors of this target ?
Year
2016
Publication Title
Design of a Janus Kinase 3 (JAK3) Specific Inhibitor 1-((2S,5R)-5-((7H-Pyrrolo[2,3-d]pyrimidin-4-yl)amino)-2-methylpiperidin-1-yl)prop-2-en-1-one (PF-06651600) Allowing for the Interrogation of JAK3 Signaling in Humans.
Abstract

Significant work has been dedicated to the discovery of JAK kinase inhibitors resulting in several compounds entering clinical development and two FDA approved NMEs. However, despite significant effort during the past 2 decades, identification of highly selective JAK3 inhibitors has eluded the scientific community. A significant effort within our research organization has resulted in the identification of the first orally active JAK3 specific inhibitor, which achieves JAK isoform specificity through covalent interaction with a unique JAK3 residue Cys-909. The relatively rapid resynthesis rate of the JAK3 enzyme presented a unique challenge in the design of covalent inhibitors with appropriate pharmacodynamics properties coupled with limited unwanted off-target reactivity. This effort resulted in the identification of 11 (PF-06651600), a potent and low clearance compound with demonstrated in vivo efficacy. The favorable efficacy and safety profile of this JAK3-specific inhibitor 11 led to its evaluation in several human clinical studies.

External Link
RCSB PDB





Ligand information

HET
7KX
Chain ID
A
HET Number
4000
Molecular Formula
C15H12N4O
Structure
2D structure
IUPAC Name
N-[3-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)phenyl]prop-2-enamide
InChI
InChI=1S/C15H12N4O/c1-2-13(20)19-11-5-3-4-10(8-11)14-12-6-7-16-15(12)18-9-17-14/h2-9H,1H2,(H,19,20)(H,16,17,18)
InChI Key
FFMBRNVTWGVDHP-UHFFFAOYSA-N
Canonical SMILES
C=CC(=O)Nc1cccc(c1)-c2ncnc(c23)[nH]cc3
Bioactivity data
CI003977

Covalent Binding

Warhead
Michael Acceptor
Reaction Mechanism
Michael Addition
Residue
CYS : 909
Residue Chain
A
Interactions
Pharmacophore Model